SNPMiner Trials by Shray Alag


SNPMiner Trials: Clinical Trial Report


Report for Clinical Trial NCT01068327

Developed by Shray Alag, 2019.
SNP Clinical Trial Gene

A Phase 1 Study of Hypofractionated Stereotactic Radiotherapy and Concurrent HIV Protease Inhibitor Nelfinavir as Part of a Neoadjuvant Regimen in Patients With Locally Advanced Pancreatic Cancer

This phase I trial is studying the side effects and best dose of stereotactic radiation therapy and nelfinavir mesylate when given together with gemcitabine hydrochloride, leucovorin calcium, and fluorouracil in treating patients with locally advanced pancreatic cancer. Stereotactic radiation therapy may be able to send x-rays directly to the tumor and cause less damage to normal tissue. Drugs, such as nelfinavir mesylate, may make tumor cells more sensitive to radiation therapy. Drugs used in chemotherapy, such as gemcitabine hydrochloride, leucovorin calcium, and fluorouracil, work in different ways to stop the growth of tumor cells, either by killing the cells or by stopping them from dividing. Giving stereotactic radiation therapy and nelfinavir mesylate together with combination chemotherapy may kill more tumor cells.

NCT01068327 Adenocarcinoma of the Pancreas Stage III Pancreatic Cancer
MeSH: Adenocarcinoma Pancreatic Neoplasms
HPO: Neoplasm of the pancreas

7 Interventions

Name: gemcitabine hydrochloride

Description: Given IV

Type: Drug

Treatment (SRT, radiosensitizer, and chemotherapy)

Name: leucovorin calcium

Description: Given IV

Type: Drug

Treatment (SRT, radiosensitizer, and chemotherapy)

Name: fluorouracil

Description: Given IV

Type: Drug

Treatment (SRT, radiosensitizer, and chemotherapy)

Name: nelfinavir mesylate

Description: Given PO

Type: Drug

Treatment (SRT, radiosensitizer, and chemotherapy)

Name: stereotactic body radiation therapy

Description: Undergo radiotherapy

Type: Radiation

Treatment (SRT, radiosensitizer, and chemotherapy)

Name: hypofractionated radiation therapy

Description: Undergo radiotherapy

Type: Radiation

Treatment (SRT, radiosensitizer, and chemotherapy)

Name: therapeutic conventional surgery

Description: Undergo surgery

Type: Procedure

Treatment (SRT, radiosensitizer, and chemotherapy)


Primary Outcomes

Description: Due to delayed toxicities attributable to radiotherapy, all toxicities observed within 1 month of surgery will be scored. Toxicity will be graded and tabled by dose levels.

Measure: Dose-limiting toxicity as assessed by National Cancer Institute Common Terminology Criteria for Adverse Events (NCI CTCAE) v3.0

Time: Within 1 month of surgery

Description: The MTD of SRT/nelfinavir mesylate is defined as the highest dose level at which no greater than one dose-limiting toxicity is observed in 6 patients.

Measure: Maximally tolerated dose (MTD) of stereotactic radiotherapy and concurrent nelfinavir mesylate

Time: 3 patients will initially be treated at each dose level (4 levels); a minimum of 1 month of observation after surgery is required in all 3 patients before escalation

Secondary Outcomes

Description: At the MTD, the rate of surgical complete resection with 90% exact binomial confidence intervals will be calculated.

Measure: Rate of complete surgical resection

Time: At the time of surgery (2-3 weeks after completion of SRT)

Description: At the MTD, the rate of pathologic response with 90% exact binomial confidence intervals will be calculated.

Measure: Pathological response

Time: Pre- to post-treatment

Description: Pre- to post-treatment changes in tumor size on CT or MRI scan (if CT is not sufficient).

Measure: Tumor response on CT/MRI

Time: Change from pre- to post-treatment

Measure: Correlation between the radiologic response and pathologic response

Time: Pre- to post-treatment

Description: Exploratory analyses will compare pre- to post-nelfinavir mesylate treatment changes in Akt levels between patients who achieve or do not achieve R0 resection by the nonparametric Wilcoxon rank sum test.

Measure: Phospho-AKT expression in pancreatic tumor tissue (correlative)

Time: Pre- to post-nelfinavir mesylate

Description: The data will be modeled using WinNonLin Pro version 4.1. The pharmacokinetic parameters will be presented as the mean and standard deviation.

Measure: Pharmacokinetics of nelfinavir mesylate (correlative)

Time: After at least 1 week of NFV: *0 h (trough); *After NFV dosing: 1, 2, 3, 4, 5, 6, 8, and 12 h

Description: There is currently insufficient clinical data to indicate whether any of the specific polymorphisms proposed to be studied, particularly those subjects with a heterozygous state, will correlate with meaningful differences in the pharmacokinetic parameters of nelfinavir mesylate. These analyses must therefore be exploratory in nature.

Measure: Pharmacogenomic status of CYP2C19*2 (G681A) (correlative)

Time: Enrollment, at the time of planned tumor tissue procurement, and at the time that re-staging studies are done

Purpose: Treatment

Single Group Assignment


There is one SNP

SNPs


1 G681A

The pharmacokinetic parameters will be presented as the mean and standard deviation.. Pharmacogenomic status of CYP2C19*2 (G681A) (correlative). --- G681A ---

To measure the pharmacogenomic status of CYP2C19*2 (G681A) in the study population. --- G681A ---



HPO Nodes


HPO:
Neoplasm of the pancreas
Genes 80
RAD51 RAD51C CDKN1A PMS1 CDKN1B RAD51D VHL CDKN2A NUTM1 KRAS CDKN2B CDKN2C CDKN2D TGFBR2 FLI1 MRE11 STK11 MSH6 BMPR1A PMS2 MLH3 BRIP1 MGMT SLC12A3 BRCA1 ACD SPINK1 BRCA2 USB1 CLCNKB TINF2 RTEL1 PDGFRB CTC1 PIK3CA NTHL1 BRD4 POT1 MAFA MC1R MITF CHEK2 WT1 APC BARD1 MLH1 PRKAR1A DKC1 NBN COL14A1 RPS20 TSC1 PARN NOP10 TSC2 EWSR1 GCGR MSH2 CDC73 SEMA4A WRAP53 PTEN MDM2 NHP2 TERC AAGAB TERT EPCAM RNF43 PALLD PALB2 TERF2IP TP53 NOTCH3 SMAD4 BAP1 CDK4 MEN1 FAN1 RAD50