SNPMiner Trials by Shray Alag


SNPMiner Trials: Clinical Trial Report


Report for Clinical Trial NCT00904150

Developed by Shray Alag, 2019.
SNP Clinical Trial Gene

A Case-control Study of the Molecular Genetics of Menstrual Migraine (Pure Menstrual and Menstrually-related Migraine)

The investigators hypothesize that genes that play a role in menstrual migraine can be identified using a well characterised migraine population and a comprehensive genome-wide association scan approach. The aim of the study is to identify genes, genetic regions, and the effect of hormones on expression profiles in women with menstrual migraine compared to a control population with no personal or first-degree family history of migraine. In this case control study, saliva samples will be taken from 300 cases and 300 controls for DNA analysis. Blood samples from 30 cases and 30 controls will be taken during the follicular phase as well as the luteal phase of the menstrual cycle for ribonucleic acid (RNA) analysis.

NCT00904150 Migraine
MeSH: Migraine Disorders Premenstrual Syndrome
HPO: Migraine


Primary Outcomes

Description: PR PROGINS

Measure: Progesterone Receptor Gene Polymorphism PROGINS in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Description: ESR1 G594A

Measure: Estrogen Receptor 1 G594a Polymorphism in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Description: ESR1 C325G

Measure: Estrogen Receptor 1 C325G Polymorphism in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Description: PgR and ESR

Measure: Menstrual Cycle Expression of PGR and ESR in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Secondary Outcomes

Description: TNF

Measure: Tumour Necrosis Factor Genotype in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Description: SYNE1

Measure: SYNE1 Genotype in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Description: TNF and SYNE1

Measure: Menstrual Cycle Expression of TNF and SYNE1 in Women With Menstrual Migraine and Women Without Migraine

Time: 6 years

Time Perspective: Cross-Sectional

Case Control


There are 2 SNPs

SNPs


1 C325G

Estrogen Receptor 1 C325G Polymorphism in Women With Menstrual Migraine and Women Without Migraine. --- C325G ---

ESR1 C325G. --- C325G ---


2 G594A

ESR1 G594A. --- G594A ---



HPO Nodes


HPO:
Migraine
Genes 135
COL3A1 IL10 PMS1 VHL CACNA1A KRAS MYD88 TSR2 IL12A COL5A1 IL12B COL5A2 RPL26 RPL27 TREX1 PMS2 ADAMTSL1 RPL35A HTR1A NOP56 MLX HLA-B SLC25A4 PDGFB PDGFRB ERAP1 AMACR RRM2B POLG RPS7 RPS10 SLC6A19 GATA1 GATA2 RPS15A RPS17 DNM1L TWNK GCDH RPS19 RPS20 RELA MSH2 NDP RPS24 RPS26 RPS27 AIP RPS28 RPS29 PRRT2 ACVRL1 APP PEX11B GPR101 GDF2 FAS ADA2 SLC1A3 KLRC4 PGK1 OPA1 SLC2A1 SH2B1 MEFV NLRC4 NLRP3 MYORG STAT4 TWIST1 FAN1 STIM1 TGFBR2 MSH6 BMPR1A MLH3 KCNA1 TRNC COX1 COX2 COX3 NF2 CYTB PIK3CA IL12A-AS1 CSNK1D SCN1A SCN2A ND1 ND4 TLR4 ND5 ND6 SCN8A MLH1 SMARCB1 KCNQ2 KCNQ3 CCR1 UBAC2 TRNF C11ORF95 C4A TRNH FGFR3 TRNK FGFR2 TRNL1 RPL35 SEMA4A TRNQ TNFRSF1A ATP1A2 TRNS1 TRNS2 RNASEH1 POLG2 TRNV TRNW ENG EPCAM TNXB RPL5 IL23R MVK NOTCH3 RPL11 SMAD3 SMAD4 RPL15 GP1BA GP1BB COL1A1 RPL18 GP9