SNPMiner Trials by Shray Alag


SNPMiner Trials: Mutation Report


Report for Mutation G143E

Developed by Shray Alag, 2019.
SNP Clinical Trial Gene

There are 3 clinical trials

Clinical Trials


1 Carboxylesterase 1 Genetic Variation and Methylphenidate in ADHD

The study team will determine the association between d,l-methylphenidate (MPH) therapeutic outcomes in ADHD patients and genetic variants of CES1 and reveal key associations between CES1 genotypes and the PK and PD of MPH.

NCT03781752 ADHD Attention Deficit Hyperactivity Disorder Drug: Methylphenidate
MeSH: Attention Deficit Disorder with Hyperactivity
HPO: Attention deficit hyperactivity disorder

The first clinically significant CES1 variant G143E (rs71647871), discovered in the study team's lab during the course of a healthy volunteer MPH PK study, led to gross impairments in MPH metabolism. --- G143E ---

The study team has established the minor allele frequency (MAF) of the G143E variant as 3-4% in the general population. --- G143E ---

G143E carrier's frequency 6-8%) with a genetically impaired ability to metabolize/deactivate the drug will receive it - exposing them to high systemic concentrations of MPH and any attendant risks or toxicities. --- G143E ---

The study team's hypothesis is that the CES1 variants, such as the G143E and D203E, can significantly alter the expression and/or activity of CES1, thereby influencing the metabolism and disposition of MPH. --- G143E ---

Primary Outcomes

Description: The maximum plasma concentration achieved after dosing.

Measure: Maximum methylphenidate plasma concentration (Cmax),

Time: up to 8 Hours

Secondary Outcomes

Description: The time after administration of a drug when the maximum plasma concentration is reached; when the rate of absorption equals the rate of elimination.

Measure: Time to maximum concentration (Tmax)

Time: up 8 hours

Description: Area under the plasma concentration-time curve from time zero to the last measurable concentration.

Measure: Area under the plasma concentration curve (AUClast)

Time: up to 8 hours

Description: Area under the plasma concentration-time curve from time zero to infinity.

Measure: Area under the plasma concentration curve (AUCinf)

Time: up to 8 hours

2 Characterisation of the Human Carboxylesterase 1 (CES1) Mutation(s) Which May be Responsible for Markedly Reduced Conversion of Oseltamivir Phosphate to Oseltamivir Carboxylate

The aim of this study is to evaluate the conversion of OP to OC in individual X and the family member of individual X. The investigators hypothesize that one or more of the single nucleoprotein polymorphisms (SNPs) of the CES1 gene represent a clinically important functional polymorphism.

NCT01443806 Metabolic Disease Drug: Oseltamivir
MeSH: Metabolic Diseases

A study from Zhu HJ et al presented potentially 2 functional polymorphisms locating in exon 4 (Gly143Glu) and 6 (Asp260fs) that can impair the CES1 hydrolytic activity to methylphenidate in vitro. --- Gly143Glu ---

Primary Outcomes

Description: Conversion of Oseltamivir at 2 and 4 hours post dose

Measure: Tmax

Time: 2 and 4 hours

Secondary Outcomes

Description: Document the sequence of all 14 exons of CES1 from individual X and the family members of individual X.

Measure: Conversion of oseltamivir phosphate to oseltamivir carboxylate

Time: one year (anticipate)

3 Genetic Determinants of ACEI Prodrug Activation

Angiotensin-converting enzyme inhibitors (ACEIs) are among the most frequently prescribed medications worldwide for the treatment of essential hypertension, left ventricular systolic dysfunction, acute myocardial infarction, and prevention of the progression of diabetic nephropathy. However, the outcome of ACEI treatment varies significantly between individuals and selected populations. Suboptimal response, therapeutic failure, and significant side effects are commonly documented in patients receiving ACEI therapy. Approximately 80% of the ACEIs available for use in the US are synthesized as esterified prodrugs in order to improve otherwise poor oral bioavailability of the active molecule. The activation of ACEI prodrugs primarily occurs in the liver via metabolic de-esterification of the parent drug. The critical activation step is essential in delivering a successful therapeutic outcome since the active metabolites are approximately 10-1000 times more potent relative to their respective parent compounds. Carboxylesterase 1 (CES1), the most abundant hydrolase in the liver, is responsible for the activation of ACEI prodrugs in humans. Marked interindividual variability in CES1 expression and activity has been documented, which results in varied therapeutic efficacy and tolerability of many drugs serving as substrates of CES1. Genetic variation of CES1 is considered to be a major factor contributing to variability in CES1 function. The study team proposes to conduct a multiple-dose healthy volunteer study to evaluate the impact of CES1 genetic variation on the activation, pharmacokinetics, and pharmacodynamics of enalapril, a model ACEI prodrug activated by CES1. The completion of this study will represent a major step towards the establishment of an evidence base from which a more individualized use of ACEI prodrugs can emerge.

NCT03051282 Healthy Volunteers Drug: Enalapril

To compare the mean AUC of enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groups. --- G143E ---

To compare the maximum enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groupsG143E carriers groups. --- G143E ---

To compare the plasma ACE activity between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment. --- G143E ---

To compare the changes of BPs between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment. --- G143E ---

- A positive urine pregnancy test in the MCRU prior to the study - No subjects weighing under 50 kg will be selected - The lack of use of acceptable methods of birth control unless abstinent - Subjects who regularly take medications, vitamins, herbal supplements - The use of any illicit drugs or habitual consumption of large quantities of ethanol (>3 drinks/day) - The consumption of grapefruit or grapefruit juice a week prior to, and during the study - Asians will not be included in the study as the CES1 SNP G143E is absent in this population - Subjects hypersensitive to enalapril - Subject with a history of angioedema - Smokers Inclusion Criteria: - Subjects must be male and female (50:50) between the ages of 18-55 years - Females must have a negative urine pregnancy test prior to the study - All subjects must have no clinically significant diseases or clinically significant abnormal laboratory values as assessed during the screening medical history, nursing assessment, and laboratory evaluations - Informed consent must be signed by the eligible subject prior to the initiation of any study procedures Exclusion Criteria: - The presence of a known medical condition that would preclude the use of enalapril - The presence of any surgical or medical condition (active or chronic) that may interfere with drug absorption, distribution, metabolism, or excretion. --- G143E ---

- A positive urine pregnancy test in the MCRU prior to the study - No subjects weighing under 50 kg will be selected - The lack of use of acceptable methods of birth control unless abstinent - Subjects who regularly take medications, vitamins, herbal supplements - The use of any illicit drugs or habitual consumption of large quantities of ethanol (>3 drinks/day) - The consumption of grapefruit or grapefruit juice a week prior to, and during the study - Asians will not be included in the study as the CES1 SNP G143E is absent in this population - Subjects hypersensitive to enalapril - Subject with a history of angioedema - Smokers Healthy Volunteers null --- G143E ---

Primary Outcomes

Description: To compare the mean AUC of enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groups

Measure: The measurements of the mean area under the curve (AUC) of enalaprilat plasma concentrations

Time: 72 hours

Secondary Outcomes

Description: To compare the maximum enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groupsG143E carriers groups

Measure: The measurements of the maximum enalaprilat plasma concentrations

Time: 72 hours

Description: To compare the plasma ACE activity between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment

Measure: The measurements of angiotensin converting enzyme (ACE) activity in plasma

Time: 72 hours

Description: To compare the changes of BPs between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment

Measure: The measurements of blood pressures (BPs) following enalapril treatment

Time: 72 hours


HPO Nodes


Attention deficit hyperactivity disorder
Genes 193
GABRB2 MKRN3 GABRB3 SNORD115-1 SOX5 UBA5 GABRG2 ATP6V1A AARS DYM WWOX HDAC4 SPG7 TRIO SMC1A IQSEC2 HDAC8 CPLX1 GATA4 IPW PWRN1 DHDDS NBN RPS20 TSC1 TSC2 NDN NDP UPF3B RREB1 BCR NSUN2 SLITRK1 CIC CHRNA7 SNORD116-1 TBC1D24 WAC HIRA SYNGAP1 TIMM8A BMPR1A PANK2 KCNA2 STXBP1 KCNB1 SYNJ1 UBE3A PIK3CA DHCR7 SCN3A UFD1 GLUD1 CLTC SCN8A VPS13A NPAP1 ASPM MLH1 FGD1 KIF14 KMT2A DNAJC12 CACNA1H FGF12 FGFR3 ABCD1 GNAQ TAF1 PWAR1 SEMA4A HERC2 DNM1 TMCO1 DHTKD1 NIPBL PHIP MED12 TBX1 KIF11 GP1BB RAD21 COL2A1 PMS1 TLK2 CACNA1A KRAS FLI1 FLII HSPG2 DPP6 C12ORF4 SATB2 PMS2 COL11A2 MAGEL2 DEAF1 FMR1 COMT NOP56 ARV1 GNE CLIP2 SZT2 PPM1D HCN1 NTRK2 IKBKG BAZ1B GRIA4 CNKSR2 MSH2 CHD7 SIN3A GRIN2A OCRL GRIN2D SIM1 RFC2 GTF2IRD1 SLC1A2 YWHAG JMJD1C SLC2A1 SH2B1 ARF1 CRKL CYFIP2 OPHN1 NECAP1 TRAK1 MKRN3-AS1 EEF1A2 FAN1 LHCGR SLC6A8 TGFBR2 MSH6 MLXIPL LIG4 LIMK1 MLH3 IGF1 PIEZO2 GTF2I PPP3CA STS THRB SEC24C COX1 COX2 COX3 ARVCF SMC3 SETD5 ZDHHC9 TKT CSNK2A1 ARID2 JRK NUS1 ND1 SETBP1 AP3B2 GNB5 ND4 ND5 ND6 PAH SLC13A5 SPRED1 TRNF PRKCG TRNH ELN TRNL1 MAPK1 TRNQ TRNS1 MAP11 TRNS2 TRNW EPCAM MCTP2 SNRPN STAG2 TBL2 CRBN PRNP RAI1 GABRA1 SEMA3E PCNT