SNPMiner Trials by Shray Alag


SNPMiner Trials: SNP Report


Report for SNP rs700518

Developed by Shray Alag, 2019.
SNP Clinical Trial Gene

There is one clinical trial.

Clinical Trials


1 CYP19A1 Gene and Pharmacogenetics of Response

Testosterone (T) replacement prevents bone loss and relieves symptoms associated with androgen deficiency in male patients with hypogonadism, but at the expense of an increase in prostate-related adverse events and in the hematocrit values above the normal which may lead to bad circulatory outcomes. Most of the effects of T on the male skeleton are mediated by its conversion to estradiol (E2) by the enzyme aromatase. Genetic variations in the aromatase (CYP19A1) gene result in enzymes with variable activity and variable levels of E2 and T. This project is designed to determine if genetic variations in the CYP19A1 gene will result in differences in the skeletal response and incidence of side effects from T treatment in patients with low T. A large number of male Veterans are on T. Results from this project will help identify patients who would benefit from the therapy from those at risk for side effects, and would definitely have an impact in the future care of these patients and male patients in general once genetic profiling becomes part of the standard of care.

NCT01378299 Hypogonadism Drug: Testosterone Cypionate
MeSH: Hypogonadism
HPO: Gonadotropin deficiency Hypergonadotropic hypogonadism Hypogonadism Hypogonadotrophic hypogonadism

Percent Change in Bone Mineral Density (BMD) According to rs700518 Polymorphism in the CYP19A1 Gene.

Percent Change in Prostate-specific Antigen (PSA) According to the rs700518 Polymorphism of the CYP19A1 Gene.

Percent Change in Bone Turnover Markers According to the rs700518 Polymorphism of the CYP19A1 Gene.

Primary Outcomes

Description: Percent change in bone mineral density from baseline to 18 months

Measure: Percent Change in Bone Mineral Density (BMD) According to rs700518 Polymorphism in the CYP19A1 Gene

Time: form baseline to 18 months

Description: Percent change in bone mineral density from baseline to 18 months.

Measure: Percent Change in Bone Mineral Density (BMD) According to the rs1062033 Polymorphism in the CYP19A1 Gene

Time: baseline to 18 months

Secondary Outcomes

Description: Percent changes in bone mineral density from baseline

Measure: Percent Change in Bone Mineral Density According to Body Mass Index (BMI)

Time: baseline to 18 months

Description: Percent change in PSA from baseline to 18 months

Measure: Percent Change in Prostate-specific Antigen (PSA) According to the rs700518 Polymorphism of the CYP19A1 Gene

Time: From baseline to 18 months

Description: Percent change in PSA from baseline at 18 months

Measure: Percent Change in Prostate-specific Antigen (PSA) According to the rs1062033 Polymorphism of the CYP19A1 Gene

Time: from baseline to 18 months

Description: Percent change in hematocrit from baseline to 18 months

Measure: Percent Change in Hematocrit According to the Genotype of the 700518 Polymorphism of the CYP19A1gene

Time: baseline to 18 months

Description: Percent change in hematocrit from baseline to 18 months

Measure: Percent Change in Hematocrit According to re1062033 Polymorphism of the CYP19A1 Gene

Time: Baseline to 18 months

Description: Percent change in gene expression from baseline to 18 months

Measure: Percent Change in Aromatase Gene Activity From the Buffy Coat According to the 700518 Polymorphism of the CYP19A1 Gene

Time: Baseline to 6 months

Description: Percent change in bone turnover from baseline to 18 months.

Measure: Percent Change in Bone Turnover Markers According to the rs700518 Polymorphism of the CYP19A1 Gene

Time: Baseline to 18 months

Description: Percent change in bone turnover markers

Measure: Percent Change in Bone Turnover Markers According to the rs1062033 Polymorphism of the CYP19A1 Gene

Time: Baseline to 18 months

Description: Percent change in bone mineral density from baseline to 18 months

Measure: Percent Change in Bone Mineral Density According the Presence of Diabetes Mellitus

Time: Baseline to 18 months

Description: Percent change in bone turnover markers from baseline to 18 months.

Measure: Percent Change in Bone Turnover Markers According the Presence of Diabetes Mellitus

Time: Baseline to 18 months


HPO Nodes


Hypogonadotrophic hypogonadism
Genes 120
HJV RAD51 SOX2 MKRN3 PCSK1 SOX3 PROK2 SNORD115-1 HFE KRAS RAF1 SOX9 SOX10 MAGEL2 LZTR1 SRA1 ZMPSTE24 NRAS LHX4 ANK1 RASA2 CLIP2 AXL RRM2B POLG DUSP6 HDAC8 WT1 IPW PWRN1 BAZ1B CDH23 POU1F1 SRY NDN CHD7 AIP PLXND1 RBM28 REV3L RRAS DCC RFC2 GPR101 PTCH1 GTF2IRD1 TYMP CCDC141 SNORD116-1 HESX1 FGF17 MAP3K1 POLR3A RNU4ATAC MKRN3-AS1 TFR2 MEN1 SIX6 RIT1 SEMA3A LHB DNAL4 LIMK1 GJB2 ANOS1 RAB3GAP1 PTPN11 OTX2 POLR3B GTF2I KISS1R NSMF PNPLA6 DHH LMNA BRAF PROKR2 WDR11 FEZF1 GLI2 TP63 HS6ST1 RAB3GAP2 FSHB SPRY4 A2ML1 NR0B1 CTDP1 NPAP1 DCAF17 PTCH2 RNF216 FGF8 NTN1 TAC3 FGFR1 NR5A1 ELN TACR3 FLRT3 PWAR1 CTNNB1 HERC2 HSD17B3 LAS1L DMRT1 KAT6B SUFU IL17RD KISS1 GNRH1 GNRHR SNRPN TBL2 PROP1 SEMA3E CBX2 PMM2 SOS1 SOS2