SNPMiner Trials by Shray Alag


SNPMiner Trials: SNP Report


Report for SNP rs679620

Developed by Shray Alag, 2019.
SNP Clinical Trial Gene

There is one clinical trial.

Clinical Trials


1 Design of a Protocol for Obtaining Genomic DNA From Saliva Using Mouthwash: Samples Taken From Patients With Periodontal Disease

Objective The aim of this study was to test a protocol for the extraction of high quality genomic DNA from saliva samples obtained with mouthwash and taken from patients with periodontal disease. Materials and methods Saliva samples were taken from 60 patients, then stored at room temperature. DNA extraction was carried out at distinct post-sampling times (10, 20 and 30 days). Evaluation of genomic DNA was performed with spectrophotometry, electrophoresis, and PCR genotyping and sequencing.

NCT02523326 Periodontal Disease Periodontal Disease " Periodontal Disease "Unrecognized Condition Periodontal Disease "Unrecognized Condition" Device: saliva samples obtained with mouthwash
MeSH: Periodontal Diseases
HPO: Periodontitis

To verify the quality and species (human) of the DNA extracted, primers were designed for the rs679620 polymorphism (forward 5´- ggg gCT TAA ggC ACA TgA gT-3; reverse 5´- ACT TCg ggA TgC CAg gAA Ag - 3´; Tm: 56°C, 40 cycles) that amplified a product of 485 bp.

Primary Outcomes

Description: high quality genomic DNA from saliva samples obtained with mouthwash.

Measure: DNA

Time: 10 days [group A], 20 days [group B], 30 days [group C]


HPO Nodes


Periodontitis
Genes 31
COL3A1 ELANE DKC1 TCIRG1 FGF3 COL5A1 SRP54 C1R C1S PARN NOP10 OCRL PLG WRAP53 AP3B1 USB1 NHP2 TERC TINF2 RTEL1 TERT CTC1 ITGB2 LYST CXCR4 SLC35C1 GFI1 CTSC NOTCH2 GORAB FERMT1